Atlases

UNDER CONSTRUCTION!

TODO: paragraph on what templates are, and how they are used.  Separate templates (average MRI model)/atlases (average MRI model + anatomical/functional labels).

There are various atlases that are available from the BIC in the MINC format. On the following pages you’ll find an overview of the atlas, methods, a link to view them online, and a download of the atlas.

Software to generate multi-subject non-linear models is here and described in the paper by VS Fonov, AC Evans, K Botteron, CR Almli, RC McKinstry, DL Collins and BDCG, Unbiased average age-appropriate atlases for pediatric studies, NeuroImage, Volume 54, Issue 1, January 2011, ISSN 1053–8119, DOI: http://dx.doi.org/10.1016/j.neuroimage.2010.07.033.

TODO: reformat the following atlas/templates:

Human

MNI-ICBM
Avg of 152 T1-weighted MRI scans
MNI-Colin27
27  MRI scans of the same individual
MNI-305
Avg of 305 T1-weighted MRI scans
Pediatric
Avg of 324 children
Parkinson’s disease
Avg of 25 PD patients
152 linear
152 nonlinear 6th generation
152 nonlinear 2009CerebrA – cortical and subcortical Mindboggle 101 labelling on symmetric MNI-ICBM2009c atlas 

Fronto-temporal Dementia MNI-FTD

original (1998)
high resolution T1w, T2w,
PDw and tissue probability maps
(2008)
MNI 305 (a.k.a. average305 or avg305) MRI Atlases 4.5-18.5y
MRI Atlases 0-4.5y
MNI PD25

Monkey

Macaque
MNI Average macaque
MNI Rhesus macaque
MNI Cynomolgus macaque

Sheep

Ovine
Average ovine template
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